BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F01SP1|AL426390
(760 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1774 1475 0.0
>3x_Contig1774
Length = 27771
Score = 1475 bits (742), Expect = 0.0
Identities = 754/760 (99%)
Strand = Plus / Plus
Query: 1 atctcggacctctttggtccactgtcccttgagggatccaagcttttggcccttctcgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3699 atctcggacctctttggtccactgtcccttgagggatccaagcttttggcccttctcgtt 3758
Query: 61 gacaagactcacgtcgacgtcttcggatcttccactgaacatgcctccagctttgaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3759 gacaagactcacgtcgacgtcttcggatcttccactgaacatgcctccagctttgaatgc 3818
Query: 121 hatattggatttgagattcgtagacgttgatattgagaactggttactgggttccatgta 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3819 aatgatggatttgagattcgtagacgttgatattgagaactggttactgggttccatgta 3878
Query: 181 cctttcaccagcmatgatgtttttcaatacgatggtaggttgggaccatctgtatttagc 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3879 cctttcaccagcaatgatgtttttcaatacgatggtaggttgggaccatctgtatttagc 3938
Query: 241 atcgatgttgttgaaagttagttcgaatactccctcgttggtaaattcgatggatttccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3939 atcgatgttgttgaaagttagttcgaatactccctcgttggtaaattcgatggatttccc 3998
Query: 301 ccagaatttctgaaccggtgttacggtgtatgagcatttccaatccctgtgttctgtgta 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3999 ccagaatttctgaaccggtgttacggtgtatgagcatttccaatccccgtgttctgtgta 4058
Query: 361 aaatgcaaaaataggtggtttatggcacactttttctgaaactaatcggatacccatatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4059 aaatgcaaaaataggtggtttatggcacactttttctgaaactaatcggatacccatatc 4118
Query: 421 ctcacgtactagttcatacgtttcacccaacaatggggtgaatggcttccgtagtgatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4119 ctcacgtactagttcatacgtttcacccaacaatggggtgaatggcttccgtagtgatct 4178
Query: 481 tgtcttttgtctgtgaatggacatgtatgacagtgcaaatgcactgatgtatttcaacct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4179 tgtcttttgtctgtgaatggacatgtatgacagtgcaaatgcactgatgtatttcaacct 4238
Query: 541 ttgaacttcgtcgtcttccattgtggcagctttgcttaamagccaactgtattcgaatgc 600
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4239 ttgaacttcgtcgtcttccattgtggcagctttgcttaaaagccaactgtattcgaatgc 4298
Query: 601 ctcggatagcacttgtaagatagatacgggttcgtttaaactgatcggcattgaaatgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4299 ctcggatagcacttgtaagatagatacgggttcgtttaaactgatcggcattgaaatgct 4358
Query: 661 ggatagatccttaccgacatttttccgtaagaatcctaataaacttggtggggttgatac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4359 ggatagatccttaccgacatttttccgtaagaatcctaataaacttggtggggttgatac 4418
Query: 721 tggtattgcgatatcgtttctgcgctttatagttttgttg 760
||||||||||||||||||||||||||||||||||||||||
Sbjct: 4419 tggtattgcgatatcgtttctgcgctttatagttttgttg 4458
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4255
Number of Sequences: 1807
Number of extensions: 4255
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 760
length of database: 10,358,551
effective HSP length: 16
effective length of query: 744
effective length of database: 10,329,639
effective search space: 7685251416
effective search space used: 7685251416
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)